| College of Maritime Science and Management |
| - Department of Merchant Marine |
| - Department of Shipping and Transportation Management |
| - Department of Transportation Science |
| - Department of Marine Engineering |
| - Bachelor Degree Program in Ocean Business Management |
|
| College of Life Sciences |
| - Department of Food Science |
| - Department of Aquaculture |
| - Department of Bioscience and Biotechnology |
| - Institute of Marine Biology |
| - Institute of Food Safety and Risk Management |
| - Bachelor Degree Program in Marine Biotechnology |
| - Doctoral Degree Program in Marine Biotechnology |
|
| College of Ocean Science and Resource |
| - Department of Environmental Biology and Fisheries Science |
| - Department of Marine Environmental Informatics |
| - Institute of Earth Sciences |
| - Institute of Marine Affairs and Resource Management |
| - Institute of Marine Environment and Ecology |
| - Doctoral Degree Program in Ocean resource and Environmental Changes |
|
| College of Engineering |
| - Department of Mechanical and Mechatronic Engineering |
| - Department of Systems Engineering and Naval Architecture |
| - Department of Harbor and River Engineering |
| - Institute of Materials Engineering |
| - Bachelor Degree Program in Ocean Engineering Technology |
| - Doctoral Degree Program in Ocean Engineering Technology |
|
| College of Electrical Engineering and Computer Science |
| - Department of Electrical Engineering |
| - Department of Computer Science and Engineering |
| - Department of Communications, Navigation and Control Engineering |
| - Department of Optoelectronics and Materials Technology |
| - Institute of Optoelectronic Sciences |
|
| College of Humanities and Social Sciences |
| - Institute of Applied Economics |
| - Institute of Education |
| - Institute of Oceanic Culture |
| - Institute of Applied English |
| - Teacher Education Center |
| - Teaching and Research Center of Humanities and Social Sciences |
| - Bachelor Degree Program in Oceanic Cultural Creative Design Industries |
| - Bachelor Degree Program in Ocean Tourism Management |
|
| College of Ocean Law and Policy |
| - Bachelor Degree Program in Ocean Law and Policy |
| - Institute of the Law of the Sea |
| - Master Degree Program in Ocean Policy |
|
| General Education Center |
|
| Center of Excellence for the Oceans |
|
| Taiwan Marine Education Center |
|
| Maritime Development and Training Center |
